Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco4Q9JIS3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smco4Q9JIS3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Nespas-201ENSMUST00000143738 1083 ntBASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Mir2861-201ENSMUST00000175539 82 ntBASIC12.55□□□□□ -0.4
Smco4Q9JIS3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms