Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Actl10-202ENSMUST00000226583 1501 ntBASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Il3ra-202ENSMUST00000223589 738 ntBASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Gm27405-201ENSMUST00000184201 112 ntBASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rhox4bQ9JI43 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gm43183-201ENSMUST00000200632 547 ntBASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rhox4bQ9JI43 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rhox4bQ9JI43 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms