Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Gm27702-201ENSMUST00000184512 56 ntBASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Grk6-207ENSMUST00000225925 2769 ntBASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.07■□□□□ 0.32
Rsph3bQ9DA80 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Gm6736-201ENSMUST00000166583 948 ntBASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Gm7787-201ENSMUST00000216858 688 ntBASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rsph3bQ9DA80 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rsph3bQ9DA80 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms