Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssmem1Q9D9Y8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Gm15358-201ENSMUST00000119249 520 ntBASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Gm44771-201ENSMUST00000206975 626 ntBASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssmem1Q9D9Y8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 AV026068-213ENSMUST00000223675 1171 ntBASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssmem1Q9D9Y8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ssmem1Q9D9Y8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssmem1Q9D9Y8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ssmem1Q9D9Y8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Mir5126-201ENSMUST00000175513 77 ntBASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssmem1Q9D9Y8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssmem1Q9D9Y8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.44□□□□□ -0.26
Ssmem1Q9D9Y8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssmem1Q9D9Y8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssmem1Q9D9Y8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms