Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssbp3Q9D032 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssbp3Q9D032 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssbp3Q9D032 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssbp3Q9D032 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13□□□□□ -0.33
Ssbp3Q9D032 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Gm11780-201ENSMUST00000136880 516 ntBASIC13□□□□□ -0.33
Ssbp3Q9D032 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Gm6089-201ENSMUST00000197666 938 ntBASIC13□□□□□ -0.33
Ssbp3Q9D032 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Gm6443-201ENSMUST00000203599 874 ntBASIC13□□□□□ -0.33
Ssbp3Q9D032 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 AC117588.1-201ENSMUST00000228510 999 ntBASIC13□□□□□ -0.33
Ssbp3Q9D032 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ssbp3Q9D032 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssbp3Q9D032 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.99□□□□□ -0.33
Ssbp3Q9D032 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssbp3Q9D032 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp3Q9D032 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ssbp3Q9D032 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp3Q9D032 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp3Q9D032 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms