Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf135Q9CWS1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Sybu-209ENSMUST00000228639 4113 ntBASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Rnf135Q9CWS1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Gm34391-201ENSMUST00000203706 907 ntBASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf135Q9CWS1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf135Q9CWS1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf135Q9CWS1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf135Q9CWS1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms