Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Gm25745-201ENSMUST00000174945 133 ntBASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lrrc40Q9CRC8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lrrc40Q9CRC8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Gm12497-201ENSMUST00000138778 237 ntBASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrrc40Q9CRC8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Gm19164-201ENSMUST00000210667 640 ntBASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrrc40Q9CRC8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms