Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rer1Q9CQU3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Rer1Q9CQU3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Gm23634-201ENSMUST00000175071 91 ntBASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Gm29518-201ENSMUST00000190858 372 ntBASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rer1Q9CQU3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rer1Q9CQU3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms