Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm11779-201ENSMUST00000118541 368 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm9727-201ENSMUST00000161387 555 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm45167-201ENSMUST00000208007 322 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Lsm7Q9CQQ8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm7Q9CQQ8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Gm9682-201ENSMUST00000197505 556 ntBASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm7Q9CQQ8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.71■□□□□ 0.1
Lsm7Q9CQQ8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm7Q9CQQ8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm7Q9CQQ8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm7Q9CQQ8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm7Q9CQQ8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm7Q9CQQ8 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms