Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim34aQ99PP6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim34aQ99PP6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Gm14722-201ENSMUST00000118943 689 ntBASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim34aQ99PP6 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.14■□□□□ 0.66
Trim34aQ99PP6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim34aQ99PP6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.14■□□□□ 0.66
Trim34aQ99PP6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Rprl2-201ENSMUST00000157150 290 ntBASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Trim34aQ99PP6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Gm14057-201ENSMUST00000120631 482 ntBASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim34aQ99PP6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gm20553-201ENSMUST00000204205 844 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.12■□□□□ 0.65
Trim34aQ99PP6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms