Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.94■□□□□ 0.78
Rtn4Q99P72 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Gm10060-201ENSMUST00000212002 111 ntBASIC19.93■□□□□ 0.78
Rtn4Q99P72 Gm5867-201ENSMUST00000063197 592 ntBASIC19.93■□□□□ 0.78
Rtn4Q99P72 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Gm13615-201ENSMUST00000120242 1612 ntBASIC19.93■□□□□ 0.78
Rtn4Q99P72 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rtn4Q99P72 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.92■□□□□ 0.78
Rtn4Q99P72 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm13418-201ENSMUST00000119097 944 ntBASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm12813-201ENSMUST00000119615 902 ntBASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm27525-201ENSMUST00000184465 107 ntBASIC19.92■□□□□ 0.78
Rtn4Q99P72 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4Q99P72 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.91■□□□□ 0.78
Rtn4Q99P72 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Gm18719-201ENSMUST00000196696 1413 ntBASIC19.91■□□□□ 0.78
Rtn4Q99P72 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rtn4Q99P72 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms