Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd3Q99LE3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Lysmd3Q99LE3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lysmd3Q99LE3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd3Q99LE3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd3Q99LE3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.13■□□□□ 0.17
Lysmd3Q99LE3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd3Q99LE3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd3Q99LE3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd3Q99LE3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms