Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm18944-201ENSMUST00000207672 643 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm5403-201ENSMUST00000117105 2795 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Gm8344-201ENSMUST00000119813 856 ntBASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 CT025552.1-201ENSMUST00000224561 521 ntBASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb20Q91XZ9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 CT009711.2-202ENSMUST00000224538 973 ntBASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb20Q91XZ9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms