Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Mir6404-201ENSMUST00000183699 94 ntBASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb4Q91XZ6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb4Q91XZ6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb4Q91XZ6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb4Q91XZ6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb4Q91XZ6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Gm15794-201ENSMUST00000120182 631 ntBASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb4Q91XZ6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms