Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab40cQ8VHQ4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab40cQ8VHQ4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Gm715-201ENSMUST00000117865 831 ntBASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab40cQ8VHQ4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab40cQ8VHQ4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gm13474-201ENSMUST00000122466 815 ntBASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab40cQ8VHQ4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab40cQ8VHQ4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms