Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Gm6659-201ENSMUST00000174752 547 ntBASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm1Q8VC85 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 AA414768-201ENSMUST00000121924 1257 ntBASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.96□□□□□ -0.01
Lsm1Q8VC85 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm1Q8VC85 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm1Q8VC85 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms