Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm42829-201ENSMUST00000198417 2585 ntBASIC18.83■□□□□ 0.6
Ccdc9Q8VC31 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.83■□□□□ 0.6
Ccdc9Q8VC31 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Rubie-203ENSMUST00000227803 2430 ntBASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc9Q8VC31 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Zfp783-201ENSMUST00000095946 670 ntBASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc9Q8VC31 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc9Q8VC31 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gm2559-201ENSMUST00000201323 363 ntBASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc9Q8VC31 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms