Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Mir6956-201ENSMUST00000183598 62 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.87■□□□□ 0.77
Chmp7Q8R1T1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Gm13616-201ENSMUST00000120600 222 ntBASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Gm5312-201ENSMUST00000203728 547 ntBASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp7Q8R1T1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Gm14722-201ENSMUST00000118943 689 ntBASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Gm7063-201ENSMUST00000186840 981 ntBASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.85■□□□□ 0.77
Chmp7Q8R1T1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp7Q8R1T1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Rprl2-201ENSMUST00000157150 290 ntBASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Chmp7Q8R1T1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms