Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gm18489-201ENSMUST00000172565 551 ntBASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gm9682-201ENSMUST00000197505 556 ntBASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gm5364-201ENSMUST00000216789 889 ntBASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Psmb5-202ENSMUST00000227257 622 ntBASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpp40Q8R1F9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm14722-201ENSMUST00000118943 689 ntBASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm4899-201ENSMUST00000178708 719 ntBASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpp40Q8R1F9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Gm43514-201ENSMUST00000198852 424 ntBASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp40Q8R1F9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rpp40Q8R1F9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpp40Q8R1F9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rpp40Q8R1F9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms