Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ebf4Q8K4J2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.25□□□□□ -0.13
Ebf4Q8K4J2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf4Q8K4J2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms