Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Olfr129-201ENSMUST00000122318 993 ntBASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cchcr1Q8K2I2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cchcr1Q8K2I2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.46■□□□□ 0.54
Cchcr1Q8K2I2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cchcr1Q8K2I2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cchcr1Q8K2I2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cchcr1Q8K2I2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cchcr1Q8K2I2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cchcr1Q8K2I2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms