Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm6257-201ENSMUST00000163864 910 ntBASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm43347-201ENSMUST00000200226 580 ntBASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfwd3Q8CIK8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Gm7506-201ENSMUST00000207758 815 ntBASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfwd3Q8CIK8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Gm4459-201ENSMUST00000118750 468 ntBASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Rfwd3Q8CIK8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms