Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox30Q8CGW4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox30Q8CGW4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Gm19164-201ENSMUST00000210667 640 ntBASIC17.02■□□□□ 0.32
Sox30Q8CGW4 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox30Q8CGW4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox30Q8CGW4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox30Q8CGW4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox30Q8CGW4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox30Q8CGW4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox30Q8CGW4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms