Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm18889-201ENSMUST00000174284 929 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Mir6990-201ENSMUST00000183724 91 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm5312-201ENSMUST00000203728 547 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Rprl2-201ENSMUST00000157150 290 ntBASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim52Q8CDV4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim52Q8CDV4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim52Q8CDV4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim52Q8CDV4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Gm10154-201ENSMUST00000084445 354 ntBASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim52Q8CDV4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Gm13616-201ENSMUST00000120600 222 ntBASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Gm10576-201ENSMUST00000191927 825 ntBASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Gm43474-201ENSMUST00000196415 774 ntBASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim52Q8CDV4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms