Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc38Q8CDN8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc38Q8CDN8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gm9172-201ENSMUST00000212092 954 ntBASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc38Q8CDN8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc38Q8CDN8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms