Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.21■□□□□ 0.34
Trim9Q8C7M3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim9Q8C7M3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim9Q8C7M3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim9Q8C7M3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Birc2-201ENSMUST00000054878 378 ntBASIC17.18■□□□□ 0.34
Trim9Q8C7M3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim9Q8C7M3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44357-201ENSMUST00000195897 142 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm19658-201ENSMUST00000196231 138 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms