Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Gm24589-201ENSMUST00000116692 94 ntBASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4Q8BQZ5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4Q8BQZ5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms