Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Samm50Q8BGH2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Gm27741-201ENSMUST00000185060 237 ntBASIC18.29■□□□□ 0.52
Samm50Q8BGH2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Samm50Q8BGH2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Gm13312-201ENSMUST00000119631 718 ntBASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Gm12895-201ENSMUST00000122214 226 ntBASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Rprl3-201ENSMUST00000157400 290 ntBASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Samm50Q8BGH2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Samm50Q8BGH2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Samm50Q8BGH2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Samm50Q8BGH2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Samm50Q8BGH2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms