Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim50Q810I2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim50Q810I2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim50Q810I2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim50Q810I2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim50Q810I2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.21■□□□□ 0.02
Trim50Q810I2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.21■□□□□ 0.02
Trim50Q810I2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim50Q810I2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim50Q810I2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim50Q810I2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim50Q810I2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 App-207ENSMUST00000227737 2827 ntBASIC15.2■□□□□ 0.02
Trim50Q810I2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim50Q810I2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trim50Q810I2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim50Q810I2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.19■□□□□ 0.02
Trim50Q810I2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.19■□□□□ 0.02
Trim50Q810I2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim50Q810I2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim50Q810I2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trim50Q810I2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.19■□□□□ 0.02
Trim50Q810I2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim50Q810I2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim50Q810I2 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.18■□□□□ 0.02
Trim50Q810I2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.18■□□□□ 0.02
Trim50Q810I2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim50Q810I2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim50Q810I2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim50Q810I2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim50Q810I2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim50Q810I2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms