Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Gm6745-201ENSMUST00000199216 526 ntBASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 AY702102-202ENSMUST00000194651 1173 ntBASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnrc18Q80WC3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnrc18Q80WC3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Mir6420-201ENSMUST00000185032 102 ntBASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnrc18Q80WC3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm5566-201ENSMUST00000116118 459 ntBASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm42612-201ENSMUST00000197986 623 ntBASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Gm43170-201ENSMUST00000199827 612 ntBASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnrc18Q80WC3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gm45384-201ENSMUST00000210451 277 ntBASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnrc18Q80WC3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Gm8602-201ENSMUST00000184045 607 ntBASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Gm12859-201ENSMUST00000117834 427 ntBASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.3■□□□□ 0.04
Tnrc18Q80WC3 Gm17150-201ENSMUST00000165577 381 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms