Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mir8102-201ENSMUST00000184148 139 ntBASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Gm7556-201ENSMUST00000201178 1084 ntBASIC23.98■■□□□ 1.43
Rpap1Q80TE0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Gm13453-201ENSMUST00000118708 357 ntBASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Mir7684-201ENSMUST00000183858 60 ntBASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Gm43767-201ENSMUST00000198933 381 ntBASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpap1Q80TE0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Gm9824-201ENSMUST00000178707 561 ntBASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Gm27989-201ENSMUST00000184721 107 ntBASIC23.96■■□□□ 1.43
Rpap1Q80TE0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpap1Q80TE0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rpap1Q80TE0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Gm13015-201ENSMUST00000118674 204 ntBASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Gm6888-201ENSMUST00000221983 706 ntBASIC23.95■■□□□ 1.42
Rpap1Q80TE0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC23.95■■□□□ 1.42
Rpap1Q80TE0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpap1Q80TE0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpap1Q80TE0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Gm43072-201ENSMUST00000200283 1671 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms