Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm27306-201ENSMUST00000183970 107 ntBASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup188Q6ZQH8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm13453-201ENSMUST00000118708 357 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm12490-201ENSMUST00000120255 560 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm25144-201ENSMUST00000179561 110 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm25352-201ENSMUST00000179815 110 ntBASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nup188Q6ZQH8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Gm15483-201ENSMUST00000120338 456 ntBASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup188Q6ZQH8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Gm14719-201ENSMUST00000121891 340 ntBASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Gm7488-201ENSMUST00000117148 684 ntBASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nup188Q6ZQH8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Mir8102-201ENSMUST00000184148 139 ntBASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.29■□□□□ 0.52
Nup188Q6ZQH8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Gm8410-201ENSMUST00000117225 605 ntBASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup188Q6ZQH8 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms