Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac4Q6NZM9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac4Q6NZM9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 BC037039-201ENSMUST00000192003 2205 ntBASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac4Q6NZM9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms