Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm7506-201ENSMUST00000207758 815 ntBASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Rps4l-201ENSMUST00000071745 943 ntBASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Gm2651-201ENSMUST00000203560 838 ntBASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg2Q6NS82 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg2Q6NS82 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Mir5131-201ENSMUST00000175426 93 ntBASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg2Q6NS82 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retreg2Q6NS82 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms