Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt39Q6IFX4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Gm6623-201ENSMUST00000173570 544 ntBASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.26■□□□□ 0.35
Krt39Q6IFX4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt39Q6IFX4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt39Q6IFX4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gm6345-202ENSMUST00000180900 204 ntBASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt39Q6IFX4 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Gm7367-201ENSMUST00000057611 492 ntBASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt39Q6IFX4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms