Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ndufa4Q62425 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ndufa4Q62425 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.33□□□□□ -0.6
Ndufa4Q62425 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.33□□□□□ -0.6
Ndufa4Q62425 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.33□□□□□ -0.6
Ndufa4Q62425 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm27463-201ENSMUST00000183569 57 ntBASIC11.33□□□□□ -0.6
Ndufa4Q62425 Odf3b-204ENSMUST00000227834 930 ntBASIC11.33□□□□□ -0.6
Ndufa4Q62425 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ndufa4Q62425 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ndufa4Q62425 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.31□□□□□ -0.6
Ndufa4Q62425 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Mir1199-201ENSMUST00000117015 119 ntBASIC11.31□□□□□ -0.6
Ndufa4Q62425 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.31□□□□□ -0.6
Ndufa4Q62425 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ndufa4Q62425 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms