Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.72■□□□□ 0.11
Six4Q61321 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.72■□□□□ 0.11
Six4Q61321 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Six4Q61321 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six4Q61321 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Six4Q61321 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.71■□□□□ 0.11
Six4Q61321 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Six4Q61321 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Six4Q61321 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six4Q61321 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.71■□□□□ 0.11
Six4Q61321 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Six4Q61321 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.71■□□□□ 0.11
Six4Q61321 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six4Q61321 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six4Q61321 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Six4Q61321 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six4Q61321 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Six4Q61321 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six4Q61321 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six4Q61321 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six4Q61321 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six4Q61321 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Six4Q61321 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Six4Q61321 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.7■□□□□ 0.1
Six4Q61321 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Six4Q61321 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.7■□□□□ 0.1
Six4Q61321 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.7■□□□□ 0.1
Six4Q61321 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Six4Q61321 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Six4Q61321 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.7■□□□□ 0.1
Six4Q61321 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Six4Q61321 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six4Q61321 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Six4Q61321 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six4Q61321 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.69■□□□□ 0.1
Six4Q61321 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Gm6550-201ENSMUST00000187574 993 ntBASIC15.69■□□□□ 0.1
Six4Q61321 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.69■□□□□ 0.1
Six4Q61321 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six4Q61321 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.69■□□□□ 0.1
Six4Q61321 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Six4Q61321 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Six4Q61321 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six4Q61321 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms