Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Timm23-208ENSMUST00000226683 750 ntBASIC13.37□□□□□ -0.27
Clns1aQ61189 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.37□□□□□ -0.27
Clns1aQ61189 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clns1aQ61189 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Gm10698-201ENSMUST00000182663 604 ntBASIC13.36□□□□□ -0.27
Clns1aQ61189 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Gm37856-201ENSMUST00000191634 999 ntBASIC13.36□□□□□ -0.27
Clns1aQ61189 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.36□□□□□ -0.27
Clns1aQ61189 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.36□□□□□ -0.27
Clns1aQ61189 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.36□□□□□ -0.27
Clns1aQ61189 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clns1aQ61189 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clns1aQ61189 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Gm11539-201ENSMUST00000119837 557 ntBASIC13.35□□□□□ -0.27
Clns1aQ61189 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms