Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Foxd3Q61060 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.35□□□□□ -0.11
Foxd3Q61060 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.35□□□□□ -0.11
Foxd3Q61060 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Foxd3Q61060 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Foxd3Q61060 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxd3Q61060 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.34□□□□□ -0.11
Foxd3Q61060 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Foxd3Q61060 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxd3Q61060 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd3Q61060 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd3Q61060 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd3Q61060 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Gm27742-201ENSMUST00000184667 60 ntBASIC14.33□□□□□ -0.12
Foxd3Q61060 Gm34391-201ENSMUST00000203706 907 ntBASIC14.33□□□□□ -0.12
Foxd3Q61060 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxd3Q61060 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd3Q61060 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxd3Q61060 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Foxd3Q61060 Olfr129-201ENSMUST00000122318 993 ntBASIC14.32□□□□□ -0.12
Foxd3Q61060 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.32□□□□□ -0.12
Foxd3Q61060 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.32□□□□□ -0.12
Foxd3Q61060 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxd3Q61060 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd3Q61060 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Foxd3Q61060 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.31□□□□□ -0.12
Foxd3Q61060 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms