Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col12a1Q60847 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col12a1Q60847 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.26■□□□□ 0.03
Col12a1Q60847 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.26■□□□□ 0.03
Col12a1Q60847 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.26■□□□□ 0.03
Col12a1Q60847 Gm16026-204ENSMUST00000162652 683 ntBASIC15.26■□□□□ 0.03
Col12a1Q60847 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.26■□□□□ 0.03
Col12a1Q60847 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Gm18018-201ENSMUST00000198273 408 ntBASIC15.26■□□□□ 0.03
Col12a1Q60847 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col12a1Q60847 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 Gm15483-201ENSMUST00000120338 456 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col12a1Q60847 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col12a1Q60847 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Gm44344-201ENSMUST00000200287 129 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.25■□□□□ 0.03
Col12a1Q60847 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.25■□□□□ 0.03
Col12a1Q60847 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col12a1Q60847 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.24■□□□□ 0.03
Col12a1Q60847 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col12a1Q60847 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Gm11918-201ENSMUST00000121660 179 ntBASIC15.24■□□□□ 0.03
Col12a1Q60847 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.24■□□□□ 0.03
Col12a1Q60847 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.24■□□□□ 0.03
Col12a1Q60847 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col12a1Q60847 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm9257-201ENSMUST00000221254 232 ntBASIC15.23■□□□□ 0.03
Col12a1Q60847 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.23■□□□□ 0.03
Col12a1Q60847 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.23■□□□□ 0.03
Col12a1Q60847 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.23■□□□□ 0.03
Col12a1Q60847 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.23■□□□□ 0.03
Col12a1Q60847 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col12a1Q60847 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms