Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gm10602-201ENSMUST00000098239 609 ntBASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-3Q5R1C3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm18666-201ENSMUST00000190039 958 ntBASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm37179-201ENSMUST00000194862 823 ntBASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms