Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8d-2Q5R1B6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav8d-2Q5R1B6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Gm6973-201ENSMUST00000117080 721 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Gm13823-201ENSMUST00000119930 345 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Gm11543-201ENSMUST00000120758 370 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8d-2Q5R1B6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Gm17837-201ENSMUST00000186435 985 ntBASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8d-2Q5R1B6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm6415-201ENSMUST00000118488 348 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm13223-201ENSMUST00000118609 747 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm10499-201ENSMUST00000174094 934 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm9824-201ENSMUST00000178707 561 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm27618-201ENSMUST00000183671 60 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm27306-201ENSMUST00000183970 107 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav8d-2Q5R1B6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Gm14722-201ENSMUST00000118943 689 ntBASIC15.11■□□□□ 0.01
Trav8d-2Q5R1B6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms