Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trdv2-2Q5R1A4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm16061-201ENSMUST00000122167 857 ntBASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Mir5122-201ENSMUST00000175004 89 ntBASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm2274-201ENSMUST00000184539 609 ntBASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm7213-201ENSMUST00000215977 950 ntBASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trdv2-2Q5R1A4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trdv2-2Q5R1A4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms