Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm43808-201ENSMUST00000202534 2065 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Gm46209-201ENSMUST00000217912 553 ntBASIC9.15□□□□□ -0.95
Herc2Q4U2R1 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.15□□□□□ -0.95
Herc2Q4U2R1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm43006-201ENSMUST00000197702 1602 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Snord83b-201ENSMUST00000104546 94 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm17794-201ENSMUST00000220252 955 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.14□□□□□ -0.95
Herc2Q4U2R1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Herc2Q4U2R1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Gm6013-201ENSMUST00000212264 699 ntBASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Gm19309-201ENSMUST00000218295 205 ntBASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Gm45930-201ENSMUST00000221330 292 ntBASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc2Q4U2R1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms