Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim40Q3UWA4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.67□□□□□ -0.06
Trim40Q3UWA4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim40Q3UWA4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Gm21814-202ENSMUST00000203277 873 ntBASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Gm10812-201ENSMUST00000099864 546 ntBASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim40Q3UWA4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim40Q3UWA4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms