Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Mir1938-201ENSMUST00000158746 100 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm18737-201ENSMUST00000173594 937 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm27680-201ENSMUST00000184192 160 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm18049-201ENSMUST00000208909 581 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm27533-201ENSMUST00000183800 152 ntBASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col19a1Q0VF58 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm13829-201ENSMUST00000119600 138 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm28631-201ENSMUST00000190740 334 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm8515-201ENSMUST00000194852 576 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm43630-201ENSMUST00000201550 776 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm9908-201ENSMUST00000211534 448 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col19a1Q0VF58 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Gm24694-201ENSMUST00000180054 110 ntBASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Gm27663-201ENSMUST00000184839 110 ntBASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Gm29667-201ENSMUST00000190817 490 ntBASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col19a1Q0VF58 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col19a1Q0VF58 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col19a1Q0VF58 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col19a1Q0VF58 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col19a1Q0VF58 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col19a1Q0VF58 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.51■□□□□ 0.23
Col19a1Q0VF58 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms