Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Atf4Q06507 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Atf4Q06507 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Atf4Q06507 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.84□□□□□ -0.03
Atf4Q06507 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.84□□□□□ -0.03
Atf4Q06507 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.84□□□□□ -0.03
Atf4Q06507 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Gm35638-201ENSMUST00000220724 652 ntBASIC14.84□□□□□ -0.03
Atf4Q06507 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.84□□□□□ -0.03
Atf4Q06507 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Atf4Q06507 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Atf4Q06507 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Atf4Q06507 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Atf4Q06507 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atf4Q06507 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.83□□□□□ -0.04
Atf4Q06507 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.83□□□□□ -0.04
Atf4Q06507 Gm15173-201ENSMUST00000122049 433 ntBASIC14.83□□□□□ -0.04
Atf4Q06507 Gm14822-201ENSMUST00000122247 291 ntBASIC14.83□□□□□ -0.04
Atf4Q06507 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.83□□□□□ -0.04
Atf4Q06507 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC14.83□□□□□ -0.04
Atf4Q06507 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Atf4Q06507 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.83□□□□□ -0.04
Atf4Q06507 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Atf4Q06507 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Atf4Q06507 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.83□□□□□ -0.04
Atf4Q06507 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 AC107452.3-201ENSMUST00000228807 1308 ntBASIC14.83□□□□□ -0.04
Atf4Q06507 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Atf4Q06507 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atf4Q06507 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Atf4Q06507 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.82□□□□□ -0.04
Atf4Q06507 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Atf4Q06507 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.82□□□□□ -0.04
Atf4Q06507 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.82□□□□□ -0.04
Atf4Q06507 Gm6550-201ENSMUST00000187574 993 ntBASIC14.82□□□□□ -0.04
Atf4Q06507 Gm10576-201ENSMUST00000191927 825 ntBASIC14.82□□□□□ -0.04
Atf4Q06507 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.82□□□□□ -0.04
Atf4Q06507 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.82□□□□□ -0.04
Atf4Q06507 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Atf4Q06507 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.82□□□□□ -0.04
Atf4Q06507 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.82□□□□□ -0.04
Atf4Q06507 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atf4Q06507 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf4Q06507 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Atf4Q06507 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms