Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.68■□□□□ 0.1
Pfdn6Q03958 Prob1-201ENSMUST00000097619 3021 ntBASIC15.68■□□□□ 0.1
Pfdn6Q03958 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.67■□□□□ 0.1
Pfdn6Q03958 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn6Q03958 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn6Q03958 Sybu-209ENSMUST00000228639 4113 ntBASIC15.66■□□□□ 0.1
Pfdn6Q03958 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn6Q03958 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pfdn6Q03958 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms