Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx2-3P97334 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Gm27321-201ENSMUST00000185021 205 ntBASIC19.52■□□□□ 0.72
Nkx2-3P97334 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.52■□□□□ 0.72
Nkx2-3P97334 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx2-3P97334 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-3P97334 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nkx2-3P97334 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Nkx2-3P97334 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22065-201ENSMUST00000103753 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22066-201ENSMUST00000103761 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24932-201ENSMUST00000103763 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24115-201ENSMUST00000103799 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22190-201ENSMUST00000103827 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22191-201ENSMUST00000103831 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24721-201ENSMUST00000103849 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm28018-201ENSMUST00000103869 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm26399-201ENSMUST00000103937 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25349-201ENSMUST00000177728 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm23616-201ENSMUST00000177797 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25871-201ENSMUST00000177816 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24752-201ENSMUST00000178240 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24496-201ENSMUST00000178287 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25649-201ENSMUST00000178476 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25548-201ENSMUST00000178681 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm23147-201ENSMUST00000178841 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm26095-201ENSMUST00000179270 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22171-201ENSMUST00000179283 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm23936-201ENSMUST00000179354 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm22619-201ENSMUST00000179516 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25255-201ENSMUST00000179579 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24755-201ENSMUST00000179691 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm26506-201ENSMUST00000179692 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm25086-201ENSMUST00000179931 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm23243-201ENSMUST00000180047 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24659-201ENSMUST00000180212 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm24169-201ENSMUST00000180244 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm23689-201ENSMUST00000180354 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm27359-201ENSMUST00000184153 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm27785-201ENSMUST00000184268 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm27466-201ENSMUST00000184396 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Gm27703-201ENSMUST00000184836 110 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.51■□□□□ 0.71
Nkx2-3P97334 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-3P97334 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.5■□□□□ 0.71
Nkx2-3P97334 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms