Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim43cP86449 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim43cP86449 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
Trim43cP86449 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.96■□□□□ 0.31
Trim43cP86449 Gm8344-201ENSMUST00000119813 856 ntBASIC16.96■□□□□ 0.31
Trim43cP86449 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim43cP86449 Gm43347-201ENSMUST00000200226 580 ntBASIC16.96■□□□□ 0.31
Trim43cP86449 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.96■□□□□ 0.31
Trim43cP86449 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim43cP86449 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43cP86449 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trim43cP86449 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Gm13418-201ENSMUST00000119097 944 ntBASIC16.95■□□□□ 0.3
Trim43cP86449 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim43cP86449 Gm4535-201ENSMUST00000182274 558 ntBASIC16.95■□□□□ 0.3
Trim43cP86449 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.95■□□□□ 0.3
Trim43cP86449 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.95■□□□□ 0.3
Trim43cP86449 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Gm10355-201ENSMUST00000097146 517 ntBASIC16.95■□□□□ 0.3
Trim43cP86449 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim43cP86449 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43cP86449 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trim43cP86449 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim43cP86449 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim43cP86449 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim43cP86449 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43cP86449 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim43cP86449 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim43cP86449 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim43cP86449 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43cP86449 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43cP86449 Grk6-207ENSMUST00000225925 2769 ntBASIC16.94■□□□□ 0.3
Trim43cP86449 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim43cP86449 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim43cP86449 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim43cP86449 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43cP86449 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43cP86449 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim43cP86449 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim43cP86449 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms